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  • Top cofit genes for GFF3464 from Variovorax sp. SCN45

    Urea ABC transporter, substrate-binding protein UrtA
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6712 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.60
    2 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) no 0.54
    3 GFF4189 NUDIX hydrolase no 0.52
    4 GFF789 protease Do no 0.50
    5 GFF3166 Transcriptional regulator, IclR family no 0.50
    6 GFF4288 Acyl-CoA dehydrogenase no 0.49
    7 GFF2019 FIG00976956: hypothetical protein no 0.48
    8 GFF4200 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) no 0.48
    9 GFF4571 Acyl-CoA dehydrogenase family protein no 0.47
    10 GFF1279 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.45
    11 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.45
    12 GFF1529 Transcriptional regulator, AcrR family no 0.45
    13 GFF5853 Type I secretion system ATPase, LssB family LapB no 0.44
    14 GFF4461 hypothetical protein no 0.44
    15 GFF1916 YpfJ protein, zinc metalloprotease superfamily no 0.44
    16 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.44
    17 GFF1810 Histidinol phosphatase and related hydrolases of the PHP family no 0.44
    18 GFF2367 Transcriptional regulator, LysR family no 0.44
    19 GFF5220 putative secreted oxidoreductase no 0.44
    20 GFF129 Ankyrin no 0.43

    Or look for negative cofitness