• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_17725 from Pseudomonas simiae WCS417

    ribose ABC transporter permease
    SEED: Xylose ABC transporter, permease protein XylH
    KEGG: ribose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17735 LacI family transcriptional regulator 0.77 0.30
    2 PS417_17720 xylitol 2-dehydrogenase (EC 1.1.1.9) (from data) 0.46 0.29
    3 PS417_09725 transporter 0.11 0.27
    4 PS417_12040 dihydroxyacetone kinase no 0.27
    5 PS417_12690 xylulose kinase 0.29 0.26
    6 PS417_12060 xylitol ABC transporter, permease component (from data) no 0.25
    7 PS417_12045 iditol 2-dehydrogenase no 0.23
    8 PS417_12065 xylitol ABC transporter, ATPase component (from data) no 0.23
    9 PS417_25235 ABC transporter substrate-binding protein no 0.22
    10 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase 0.42 0.21
    11 PS417_09710 dehydrogenase no 0.21
    12 PS417_12310 methionine synthase 0.55 0.20
    13 PS417_10675 TetR family transcriptional regulator no 0.20
    14 PS417_09720 methyltransferase no 0.19
    15 PS417_14940 LysR family transcriptional regulator no 0.19
    16 PS417_12050 short-chain dehydrogenase no 0.19
    17 PS417_16700 hypothetical protein no 0.19
    18 PS417_02765 phosphate starvation-inducible protein PsiF no 0.19
    19 PS417_05940 spermidine/putrescine ABC transporter substrate-binding protein no 0.18
    20 PS417_10745 hypothetical protein no 0.18

    Or look for negative cofitness