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  • Top cofit genes for PS417_17720 from Pseudomonas simiae WCS417

    xylitol 2-dehydrogenase (EC 1.1.1.9) (from data)
    Original annotation: iditol 2-dehydrogenase
    SEED: Xylitol dehydrogenase (EC 1.1.1.9)
    KEGG: L-iditol 2-dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12040 dihydroxyacetone kinase no 0.39
    2 PS417_17735 LacI family transcriptional regulator 0.16 0.36
    3 PS417_17725 ribose ABC transporter permease 0.46 0.29
    4 PS417_12065 xylitol ABC transporter, ATPase component (from data) no 0.28
    5 PS417_12690 xylulose kinase 0.24 0.27
    6 PS417_12060 xylitol ABC transporter, permease component (from data) no 0.27
    7 PS417_12035 dihydroxyacetone kinase no 0.25
    8 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase no 0.23
    9 PS417_24155 ATP-binding protein no 0.21
    10 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 0.21
    11 PS417_20985 porin 0.76 0.20
    12 PS417_20665 hypothetical protein no 0.20
    13 PS417_19555 RNA polymerase sigma70 no 0.20
    14 PS417_28220 LysR family transcriptional regulator 0.77 0.20
    15 PS417_25235 ABC transporter substrate-binding protein no 0.20
    16 PS417_22165 LysR family transcriptional regulator no 0.19
    17 PS417_09725 transporter 0.09 0.19
    18 PS417_01565 imidazole glycerol phosphate synthase 0.78 0.19
    19 PS417_15085 ATPase AAA no 0.19
    20 PS417_00185 tryptophan synthase subunit beta 0.74 0.19

    Or look for negative cofitness