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  • Top cofit genes for GFF3458 from Variovorax sp. SCN45

    Rubisco activation protein CbbQ
    SEED: Rubisco activation protein CbbQ
    KEGG: nitric oxide reductase NorQ protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.62
    2 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.62
    3 GFF284 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.61
    4 GFF5356 Aldose 1-epimerase no 0.60
    5 GFF7373 CaiB/BaiF family protein no 0.58
    6 GFF7313 hypothetical protein no 0.56
    7 GFF76 Alkanesulfonates transport system permease protein no 0.56
    8 GFF66 hypothetical protein no 0.56
    9 GFF6390 GtrA-like protein no 0.56
    10 GFF2454 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.55
    11 GFF5710 no description no 0.55
    12 GFF1907 Transcriptional regulator, AraC family 0.28 0.55
    13 GFF4816 FIG01074109: hypothetical protein no 0.52
    14 GFF6262 Transcriptional regulator PhnF no 0.52
    15 GFF5956 FIG01055484: hypothetical protein no 0.52
    16 GFF3962 Opine dehydrogenase (EC 1.5.1.28) no 0.52
    17 GFF4897 Probable ALANIN-rich signal peptide protein no 0.52
    18 GFF5582 BUG/TctC family periplasmic protein no 0.51
    19 GFF636 Urea ABC transporter, substrate-binding protein UrtA no 0.51
    20 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.51

    Or look for negative cofitness