Top cofit genes for GFF3456 from Variovorax sp. SCN45

Possible regulatory protein similar to urea ABC transporter, substrate binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.77
2 GFF5402 Transcriptional regulator, IclR family no 0.77
3 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.69
4 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.29 0.67
5 GFF2504 Cell division protein ZapD no 0.67
6 GFF7295 HPr kinase/phosphorylase no 0.67
7 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.66
8 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.65
9 GFF6533 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.65
10 GFF2593 Integral membrane protein no 0.64
11 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.24 0.63
12 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.62
13 GFF7085 BUG/TctC family periplasmic protein no 0.62
14 GFF7375 Arginine:pyruvate transaminase no 0.62
15 GFF7373 CaiB/BaiF family protein no 0.61
16 GFF6294 Cell division protein no 0.61
17 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.61
18 GFF4397 hypothetical protein no 0.61
19 GFF5838 Probable signal peptide protein precursor no 0.61
20 GFF1607 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.59

Or look for negative cofitness