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  • Top cofit genes for PS417_17680 from Pseudomonas simiae WCS417

    ABC transporter
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09595 membrane protein no 0.27
    2 PS417_00385 Fur family transcriptional regulator no 0.25
    3 PS417_03830 protein disaggregation chaperone 0.44 0.22
    4 PS417_08170 capsular biosynthesis protein no 0.21
    5 PS417_09590 membrane protein no 0.21
    6 PS417_24600 hydrogenase no 0.21
    7 PS417_09615 glycosyl transferase family 1 no 0.21
    8 PS417_09585 acetyltransferase no 0.20
    9 PS417_22775 histidine kinase no 0.20
    10 PS417_19025 aspartate aminotransferase no 0.20
    11 PS417_15280 type VI secretion protein 0.31 0.20
    12 PS417_28050 hypothetical protein no 0.20
    13 PS417_23915 pantoate--beta-alanine ligase no 0.20
    14 PS417_26775 thiazole synthase 0.26 0.19
    15 PS417_22405 7-carboxy-7-deazaguanine synthase no 0.19
    16 PS417_02255 lipopolysaccharide kinase no 0.19
    17 PS417_09620 lipopolysaccharide biosynthesis protein no 0.19
    18 PS417_09625 sugar ABC transporter substrate-binding protein no 0.19
    19 PS417_23385 cytochrome o ubiquinol oxidase subunit I no 0.19
    20 PS417_03670 MerR family transcriptional regulator no 0.19

    Or look for negative cofitness