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Cofit
Protein
Homologs
Top cofit genes for GFF3454 from
Sphingobium sp. HT1-2
ApaG protein
SEED: ApaG protein
KEGG: ApaG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5365
Putative transmembrane protein
no
0.85
2
GFF3937
tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3)
0.26
0.82
3
GFF4206
Outer membrane beta-barrel assembly protein BamE
no
0.78
4
GFF2960
hypothetical protein
no
0.77
5
GFF3540
Molybdopterin molybdenumtransferase (EC 2.10.1.1)
0.59
0.76
6
GFF1754
putative oxidoreductase, nitronate monooxygenase family
0.37
0.76
7
GFF3360
Aerobic carbon monoxide dehydrogenase (quinone), small chain (EC 1.2.5.3)
no
0.76
8
GFF4012
hypothetical protein
no
0.75
9
GFF4135
hypothetical protein
no
0.74
10
GFF2865
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
no
0.74
11
GFF1914
NADH-ubiquinone oxidoreductase-related protein
no
0.74
12
GFF1117
hypothetical protein
no
0.74
13
GFF3399
Lactate-responsive regulator LldR in Enterobacteria, GntR family
no
0.72
14
GFF2642
hypothetical protein
no
0.72
15
GFF303
Phage protein
no
0.72
16
GFF2455
CDP-alcohol phosphatidyltransferase
no
0.72
17
GFF419
'23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185)' transl_table=11
0.26
0.72
18
GFF3682
hypothetical protein
no
0.71
19
GFF1414
Low-affinity inorganic phosphate transporter
0.60
0.71
20
GFF2494
TspO and MBR like proteins
no
0.71
Or look for
negative cofitness