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  • Top cofit genes for PS417_17670 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01635 nitrogen regulation protein NR(I) no 0.27
    2 PS417_05815 recombinase RecA no 0.26
    3 PS417_01640 histidine kinase 0.68 0.25
    4 PS417_26250 peptidase M19 0.47 0.25
    5 PS417_19690 histidine kinase 0.25 0.24
    6 PS417_19665 flagellar motor protein MotD 0.71 0.24
    7 PS417_26225 electron transfer flavoprotein subunit beta no 0.23
    8 PS417_05100 RNA polymerase sigma factor no 0.23
    9 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.22
    10 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.22
    11 PS417_19745 flagellar assembly protein FliO no 0.22
    12 PS417_19655 chemotaxis protein CheW no 0.22
    13 PS417_22895 tyrosine recombinase XerD no 0.22
    14 PS417_06200 protein-PII uridylyltransferase 0.61 0.22
    15 PS417_26280 NADPH:quinone reductase 0.32 0.22
    16 PS417_12805 glycogen branching protein 0.25 0.22
    17 PS417_18540 colicin V production CvpA no 0.22
    18 PS417_21575 chemotaxis protein no 0.22
    19 PS417_24710 lipoprotein no 0.22
    20 PS417_27245 aminotransferase DegT 0.44 0.22

    Or look for negative cofitness