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  • Top cofit genes for GFF3449 from Variovorax sp. SCN45

    Intradiol ring-cleavage dioxygenase:Catechol dioxygenase, N-terminal
    SEED: Intradiol ring-cleavage dioxygenase:Catechol dioxygenase, N-terminal

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7309 Transcriptional regulator, LysR family no 0.58
    2 GFF6397 LysR family transcriptional regulator PA2758 no 0.54
    3 GFF5105 Transcriptional regulator, MerR family no 0.54
    4 GFF1721 no description no 0.53
    5 GFF5602 FIG00348944: hypothetical protein no 0.53
    6 GFF842 hypothetical protein no 0.53
    7 GFF2711 hypothetical protein no 0.50
    8 GFF1869 no description no 0.50
    9 GFF2316 FIG015547: peptidase, M16 family no 0.49
    10 GFF2028 Uncharacterized MFS-type transporter no 0.49
    11 GFF1344 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.49
    12 GFF2803 Alanine transaminase (EC 2.6.1.2) no 0.48
    13 GFF7199 Alkanesulfonates-binding protein no 0.48
    14 GFF2171 MBL-fold metallohydrolase SPO0683 no 0.48
    15 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    16 GFF4916 FIG00959407: hypothetical protein no 0.48
    17 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.18 0.48
    18 GFF4995 no description no 0.47
    19 GFF5498 Uncharacterized protein SPO0681 no 0.47
    20 GFF4705 Monooxygenase, flavin-binding family no 0.47

    Or look for negative cofitness