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  • Top cofit genes for GFF3447 from Variovorax sp. SCN45

    FIG00555764: hypothetical protein
    SEED: FIG00555764: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF861 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase no 0.52
    2 GFF4301 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.47
    3 GFF6174 Fluoride ion transporter CrcB no 0.46
    4 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.46
    5 GFF1247 Sulfate and thiosulfate binding protein CysP no 0.46
    6 GFF6101 Ser/Thr protein phosphatase family protein no 0.46
    7 GFF5968 no description no 0.46
    8 GFF1339 ABC transporter, permease protein 2 RSc1752 no 0.45
    9 GFF2607 hypothetical protein no 0.45
    10 GFF3100 Aspartyl protease no 0.44
    11 GFF2423 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) no 0.44
    12 GFF2247 hypothetical protein no 0.43
    13 GFF3409 Probable lipoprotein signal peptide no 0.42
    14 GFF5944 Adenylosuccinate lyase (EC 4.3.2.2) no 0.42
    15 GFF7203 Two-component transcriptional response regulator, LuxR family 0.54 0.42
    16 GFF4070 no description no 0.42
    17 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.41
    18 GFF3514 no description no 0.41
    19 GFF721 O-acetyl-ADP-ribose deacetylase no 0.41
    20 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.41

    Or look for negative cofitness