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  • Top cofit genes for GFF3446 from Variovorax sp. SCN45

    Quinone oxidoreductase (EC 1.6.5.5)
    SEED: Quinone oxidoreductase (EC 1.6.5.5)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.70
    2 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.62
    3 GFF2039 Transcriptional regulator, AcrR family no 0.61
    4 GFF4768 Transcriptional regulator, MarR family no 0.60
    5 GFF2246 cellular communication/signal transduction no 0.59
    6 GFF5640 Putative formate dehydrogenase oxidoreductase protein 0.30 0.59
    7 GFF3229 hypothetical protein no 0.59
    8 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.57
    9 GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.57
    10 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.56
    11 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.56
    12 GFF4043 Copper sensory histidine kinase CusS no 0.56
    13 GFF1155 Putative transmembrane protein no 0.56
    14 GFF7319 hypothetical protein no 0.56
    15 GFF3120 no description no 0.55
    16 GFF5114 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF no 0.55
    17 GFF3800 Fumarylacetoacetate hydrolase family protein no 0.55
    18 GFF1994 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.54
    19 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) no 0.54
    20 GFF363 Transcriptional regulator, Crp/Fnr family no 0.54

    Or look for negative cofitness