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  • Top cofit genes for GFF3444 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2105 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.73
    2 GFF4043 Copper sensory histidine kinase CusS no 0.60
    3 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.58
    4 GFF3156 FIG00441737: hypothetical protein no 0.58
    5 GFF6526 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.57
    6 GFF4290 MaoC-like dehydratase no 0.55
    7 GFF2631 Transcriptional regulator, ArsR family no 0.54
    8 GFF2132 Thiol:disulfide interchange protein DsbC no 0.54
    9 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.53
    10 GFF2556 UPF0337 family protein no 0.53
    11 GFF4208 BUG/TctC family periplasmic protein no 0.53
    12 GFF3094 17 kDa surface antigen no 0.53
    13 GFF823 Inner membrane protein YbaL, KefB/KefC family no 0.52
    14 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) no 0.51
    15 GFF6822 Peptidase C14, caspase catalytic subunit p20 no 0.51
    16 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein no 0.51
    17 GFF2285 Transcriptional regulator, RpiR family no 0.49
    18 GFF1452 Predicted gluconate TRAP family transporter, DctM subunit no 0.49
    19 GFF4039 Heavy metal RND efflux outer membrane protein, CzcC family no 0.49
    20 GFF1441 putative membrane protein no 0.48

    Or look for negative cofitness