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  • Top cofit genes for PS417_17610 from Pseudomonas simiae WCS417

    AsnC family transcriptional regulator
    SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11175 AraC family transcriptional regulator no 0.27
    2 PS417_02175 transcriptional regulator 0.29 0.25
    3 PS417_17595 amino acid ABC transporter permease no 0.25
    4 PS417_17600 amino acid ABC transporter permease no 0.24
    5 PS417_17580 citrulline utilization hydrolase (from data) 0.32 0.23
    6 PS417_17585 ornithine cyclodeaminase 0.48 0.23
    7 PS417_27585 diaminopimelate epimerase no 0.23
    8 PS417_19200 fumarate hydratase no 0.22
    9 PS417_18690 aromatic amino acid aminotransferase no 0.22
    10 PS417_07170 hypothetical protein no 0.21
    11 PS417_19645 chemotaxis protein 0.22 0.21
    12 PS417_22265 chromosome segregation protein ScpA no 0.21
    13 PS417_02520 chemotaxis protein no 0.21
    14 PS417_09480 peptidase M24 0.23 0.20
    15 PS417_14155 branched-chain amino acid ABC transporter permease 0.31 0.20
    16 PS417_15830 GNAT family acetyltransferase no 0.20
    17 PS417_17605 amino acid transporter 0.72 0.20
    18 PS417_02665 branched-chain amino acid ABC transporter permease 0.43 0.19
    19 PS417_02660 branched-chain amino acid transporter permease subunit LivH 0.43 0.19
    20 PS417_26155 hypothetical protein no 0.19

    Or look for negative cofitness