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  • Top cofit genes for GFF3440 from Variovorax sp. SCN45

    FIG00460300: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF680 RecA/RadA recombinase no 0.59
    2 GFF1016 no description no 0.58
    3 GFF1419 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.56
    4 GFF1577 hypothetical protein no 0.54
    5 GFF877 putative membrane protein no 0.53
    6 GFF5938 T6SS component TssF (ImpG/VasA) no 0.53
    7 GFF4936 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    8 GFF6610 putative lipoprotein no 0.50
    9 GFF4482 Transcriptional regulator MraZ 0.15 0.50
    10 GFF4800 DNA mismatch repair protein MutL 0.47 0.50
    11 GFF6764 Transcriptional regulator, MarR family no 0.49
    12 GFF583 Tripartite tricarboxylate transporter TctB family no 0.49
    13 GFF7194 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.49
    14 GFF2400 no description no 0.48
    15 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    16 GFF2030 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.48
    17 GFF5625 Putative transmembrane protein no 0.47
    18 GFF5289 hypothetical protein no 0.47
    19 GFF730 Class A beta-lactamase (EC 3.5.2.6) no 0.47
    20 GFF20 hypothetical protein no 0.47

    Or look for negative cofitness