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  • Top cofit genes for GFF344 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6324 Kup system potassium uptake protein no 0.66
    2 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.65
    3 GFF6328 LPS-assembly lipoprotein LptE no 0.64
    4 GFF7156 hypothetical protein no 0.64
    5 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) no 0.63
    6 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.62
    7 GFF1261 no description no 0.62
    8 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.61
    9 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.60
    10 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I no 0.60
    11 GFF2815 Primosomal replication protein N no 0.59
    12 GFF4454 Exoribonuclease II (EC 3.1.13.1) no 0.59
    13 GFF6288 L-lysine permease no 0.59
    14 GFF6401 Formiminoglutamic iminohydrolase (EC 3.5.3.13) no 0.59
    15 GFF6032 Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) no 0.59
    16 GFF5877 Probable proline rich signal peptide protein no 0.59
    17 GFF4383 hypothetical protein no 0.59
    18 GFF6888 Permease of the drug/metabolite transporter (DMT) superfamily no 0.58
    19 GFF3546 Chaperone protein HtpG no 0.58
    20 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) no 0.58

    Or look for negative cofitness