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  • Top cofit genes for GFF3439 from Variovorax sp. SCN45

    L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17)
    SEED: L-serine dehydratase (EC 4.3.1.17)
    KEGG: L-serine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF552 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) 0.65 0.57
    2 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.54
    3 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.53
    4 GFF2838 hypothetical protein no 0.53
    5 GFF5895 hypothetical protein no 0.52
    6 GFF5893 Low-specificity L-threonine aldolase (EC 4.1.2.48) 0.51 0.52
    7 GFF486 FIG00582348: hypothetical protein no 0.51
    8 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.50
    9 GFF5805 Putative transmembrane protein no 0.49
    10 GFF1306 no description no 0.49
    11 GFF629 hypothetical protein no 0.48
    12 GFF6373 T6SS component TssA (ImpA) no 0.48
    13 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.47
    14 GFF7279 no description no 0.47
    15 GFF1775 no description no 0.46
    16 GFF4581 hypothetical protein no 0.46
    17 GFF2357 DNA repair protein RecN no 0.46
    18 GFF6010 MmgE/PrpD family protein no 0.46
    19 GFF1786 hypothetical protein no 0.46
    20 GFF1803 hypothetical protein no 0.45

    Or look for negative cofitness