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  • Top cofit genes for PS417_17600 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
    KEGG: histidine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17605 amino acid transporter no 0.80
    2 PS417_17595 amino acid ABC transporter permease no 0.74
    3 PS417_17590 ABC transporter substrate-binding protein no 0.54
    4 PS417_17585 ornithine cyclodeaminase no 0.54
    5 PS417_17580 citrulline utilization hydrolase (from data) no 0.47
    6 PS417_02175 transcriptional regulator no 0.31
    7 PS417_17475 histidine kinase no 0.30
    8 PS417_17460 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) no 0.26
    9 PS417_01265 CbbBc protein no 0.26
    10 PS417_07575 multifunctional fatty acid oxidation complex subunit alpha no 0.25
    11 PS417_17610 AsnC family transcriptional regulator no 0.24
    12 PS417_24810 aldehyde dehydrogenase no 0.24
    13 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) no 0.24
    14 PS417_21680 succinylglutamate desuccinylase no 0.23
    15 PS417_02150 potassium/proton antiporter no 0.22
    16 PS417_24805 Fis family transcriptional regulator 0.19 0.20
    17 PS417_23900 poly(A) polymerase no 0.20
    18 PS417_01210 hypothetical protein no 0.20
    19 PS417_14075 hypothetical protein no 0.19
    20 PS417_01485 ABC transporter permease no 0.18

    Or look for negative cofitness