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  • Top cofit genes for GFF3436 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5330 no description no 0.45
    2 GFF5546 Lactam utilization protein LamB no 0.44
    3 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.43
    4 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor no 0.43
    5 GFF7280 no description no 0.43
    6 GFF888 BUG/TctC family periplasmic protein no 0.42
    7 GFF6308 no description no 0.42
    8 GFF5507 Esterase/lipase/thioesterase family protein no 0.42
    9 GFF3146 no description no 0.42
    10 GFF3767 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases no 0.41
    11 GFF4121 no description no 0.41
    12 GFF4372 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.40
    13 GFF5723 Flagellar protein FlgJ [peptidoglycan hydrolase] 0.53 0.40
    14 GFF5162 Mg(2+)-transport-ATPase-associated protein MgtC no 0.40
    15 GFF6483 Serine esterase no 0.40
    16 GFF2774 Auxin efflux carrier family protein no 0.40
    17 GFF4927 Citrate-proton symporter no 0.39
    18 GFF4246 FIG00464377: hypothetical protein no 0.39
    19 GFF3759 Uridine kinase family protein YggC homolog no 0.39
    20 GFF5510 protein of unknown function DUF306, Meta and HslJ no 0.39

    Or look for negative cofitness