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  • Top cofit genes for GFF3435 from Variovorax sp. SCN45

    predicted integral membrane protein
    SEED: predicted integral membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6490 Uncharacterized conserved protein YfiP, contains DTW domain 0.21 0.58
    2 GFF6734 Transcriptional regulator, AraC family no 0.52
    3 GFF6545 Uncharacterized MFS-type transporter no 0.49
    4 GFF456 Transcriptional regulator, AraC family no 0.49
    5 GFF6274 Ketosteroid isomerase-related protein no 0.48
    6 GFF5851 TPR repeat no 0.48
    7 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.42 0.46
    8 GFF4929 Aminotransferase, class III no 0.46
    9 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.45
    10 GFF6391 RfbJ protein no 0.45
    11 GFF4863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.45
    12 GFF1367 Transcriptional regulator, LysR family no 0.44
    13 GFF5379 Putative hydrolase no 0.44
    14 GFF1265 cAMP-binding protein no 0.44
    15 GFF4399 hypothetical protein no 0.43
    16 GFF6855 hypothetical protein 0.16 0.43
    17 GFF2311 Putative PRS2 protein 0.16 0.43
    18 GFF7159 Putative reductase no 0.42
    19 GFF3216 hypothetical protein no 0.42
    20 GFF334 Transcriptional regulator, AraC family no 0.42

    Or look for negative cofitness