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  • Top cofit genes for GFF3432 from Variovorax sp. SCN45

    L-carnitine dehydratase/bile acid-inducible protein F
    SEED: L-carnitine dehydratase/bile acid-inducible protein F

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.65
    2 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) 0.31 0.58
    3 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.56
    4 GFF1125 Superoxide dismutase [Mn] (EC 1.15.1.1) no 0.54
    5 GFF2877 Ribonuclease BN no 0.54
    6 GFF812 Putative reductase no 0.51
    7 GFF1897 Two-component system sensor histidine kinase/response regulator hybrid no 0.51
    8 GFF4127 Dibenzothiophene desulfurization enzyme B no 0.51
    9 GFF2458 CzcABC family efflux RND transporter, membrane fusion protein no 0.51
    10 GFF4017 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.51
    11 GFF3689 FIG01198523: hypothetical protein no 0.51
    12 GFF6726 hypothetical protein no 0.50
    13 GFF5210 hypothetical protein no 0.50
    14 GFF801 Murein hydrolase activator NlpD no 0.50
    15 GFF6677 regulatory protein no 0.49
    16 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.49
    17 GFF3491 Ser/Thr protein phosphatase family protein no 0.49
    18 GFF3135 no description no 0.49
    19 GFF4180 hypothetical protein no 0.49
    20 GFF5809 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system 0.59 0.49

    Or look for negative cofitness