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Cofit
Protein
Homologs
Top cofit genes for GFF3424 from
Variovorax sp. SCN45
FIG00443816: hypothetical protein
KEGG: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2238
hypothetical protein
no
0.60
2
GFF1166
Murein-DD-endopeptidase (EC 3.4.99.-)
no
0.60
3
GFF4305
ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.59
4
GFF5432
Glutathione S-transferase family protein
0.21
0.59
5
GFF4710
MutT/Nudix family protein
no
0.58
6
GFF4575
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.57
7
GFF2199
Type I secretion outer membrane protein, TolC family
no
0.57
8
GFF1048
Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme
no
0.56
9
GFF2603
Tripartite tricarboxylate transporter TctC family
no
0.56
10
GFF3615
Oxidoreductase, short-chain dehydrogenase/reductase family
0.29
0.56
11
GFF1954
no description
no
0.55
12
GFF5618
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.55
13
GFF678
Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
0.56
0.55
14
GFF395
D-amino acid dehydrogenase (EC 1.4.99.6)
no
0.55
15
GFF4583
TRAP-type C4-dicarboxylate transport system, large permease component
no
0.55
16
GFF2160
Aspartate carbamoyltransferase (EC 2.1.3.2)
no
0.54
17
GFF6767
no description
no
0.54
18
GFF3546
Chaperone protein HtpG
0.39
0.54
19
GFF4638
CDP-glucose 4,6-dehydratase (EC 4.2.1.45)
no
0.53
20
GFF1779
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
no
0.53
Or look for
negative cofitness