• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_17505 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: Transcriptional regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.82 0.65
    2 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.83 0.62
    3 PS417_17435 dehydrogenase 0.82 0.61
    4 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.82 0.61
    5 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.81 0.61
    6 PS417_17415 histidine kinase 0.95 0.59
    7 PS417_21750 acetyl-CoA synthetase 0.88 0.58
    8 PS417_17495 multidrug ABC transporter permease 0.64 0.58
    9 PS417_17485 membrane protein 0.49 0.55
    10 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein 0.38 0.54
    11 PS417_17425 hypothetical protein no 0.53
    12 PS417_16570 isocitrate lyase 0.47 0.52
    13 PS417_19965 histidine kinase 0.38 0.51
    14 PS417_17455 cytochrome C 0.92 0.47
    15 PS417_17450 amino acid ABC transporter substrate-binding protein 0.67 0.46
    16 PS417_24765 membrane protein no 0.45
    17 PS417_26040 malate synthase 0.88 0.44
    18 PS417_05840 LuxR family transcriptional regulator 0.23 0.42
    19 PS417_17490 ABC transporter ATP-binding protein 0.58 0.38
    20 PS417_11845 RpiR family transcriptional regulator no 0.37

    Or look for negative cofitness