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  • Top cofit genes for GFF3416 from Variovorax sp. SCN45

    Alkanesulfonates transport system permease protein
    SEED: Alkanesulfonates transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6575 Conjugative transfer protein TrbJ no 0.69
    2 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD no 0.57
    3 GFF2410 Intracellular protease no 0.56
    4 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.55
    5 GFF6455 Bll3817 protein no 0.55
    6 GFF2711 hypothetical protein no 0.55
    7 GFF5053 Uncharacterized protein SPO0681 no 0.54
    8 GFF3273 Translation initiation factor 2 no 0.52
    9 GFF6522 Zinc-regulated outer membrane receptor no 0.52
    10 GFF1276 Sarcosine oxidase no 0.51
    11 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.50
    12 GFF6385 Mll4878 protein no 0.50
    13 GFF5352 Split AAA-ATPase protein PA0787 no 0.49
    14 GFF1652 Uncharacterized MFS-type transporter no 0.49
    15 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.48
    16 GFF1353 Short-chain dehydrogenase/reductase SDR no 0.48
    17 GFF293 no description no 0.47
    18 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    19 GFF427 no description no 0.47
    20 GFF2881 Putative transmembrane protein no 0.47

    Or look for negative cofitness