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  • Top cofit genes for PS417_17470 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: DNA-binding response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17475 histidine kinase 0.74 0.28
    2 PS417_17460 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) 0.91 0.24
    3 PS417_17505 LuxR family transcriptional regulator 0.88 0.21
    4 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.78 0.19
    5 PS417_02655 amino acid ABC transporter substrate-binding protein no 0.19
    6 PS417_13645 ABC transporter no 0.18
    7 PS417_08275 ethanolamin permease no 0.18
    8 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.48 0.18
    9 PS417_17455 cytochrome C 0.87 0.18
    10 PS417_27275 hypothetical protein no 0.18
    11 PS417_17415 histidine kinase 0.89 0.18
    12 PS417_17605 amino acid transporter no 0.18
    13 PS417_01795 glucosyltransferase MdoH no 0.17
    14 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.79 0.17
    15 PS417_06900 hypothetical protein no 0.17
    16 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.83 0.17
    17 PS417_10655 LuxR family transcriptional regulator no 0.16
    18 PS417_02610 hypothetical protein no 0.16
    19 PS417_19450 Patatin no 0.16
    20 PS417_21380 GntR family transcriptional regulator no 0.16

    Or look for negative cofitness