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  • Top cofit genes for PS417_17460 from Pseudomonas simiae WCS417

    Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data)
    Original annotation: quinonprotein alcohol dehydrogenase
    SEED: Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8)
    KEGG: alcohol dehydrogenase (cytochrome c)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.81 0.56
    2 PS417_17475 histidine kinase 0.78 0.51
    3 PS417_17415 histidine kinase 0.95 0.50
    4 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.85 0.42
    5 PS417_17425 hypothetical protein no 0.40
    6 PS417_21750 acetyl-CoA synthetase 0.83 0.39
    7 PS417_17455 cytochrome C 0.94 0.39
    8 PS417_17435 dehydrogenase 0.63 0.39
    9 PS417_26040 malate synthase 0.35 0.38
    10 PS417_16570 isocitrate lyase 0.71 0.38
    11 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.90 0.38
    12 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.92 0.37
    13 PS417_17505 LuxR family transcriptional regulator 0.93 0.36
    14 PS417_17485 membrane protein 0.53 0.35
    15 PS417_17495 multidrug ABC transporter permease 0.57 0.32
    16 PS417_17500 sulfurtransferase 0.93 0.31
    17 PS417_20535 peptidylprolyl isomerase 0.59 0.30
    18 PS417_17450 amino acid ABC transporter substrate-binding protein 0.69 0.30
    19 PS417_04860 ATPase 0.35 0.29
    20 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein 0.58 0.29

    Or look for negative cofitness