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  • Top cofit genes for PS417_17450 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: amino acid ABC transporter, periplasmic substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.75 0.75
    2 PS417_17435 dehydrogenase 0.77 0.74
    3 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.68 0.71
    4 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC 0.71 0.70
    5 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein 0.84 0.69
    6 PS417_17495 multidrug ABC transporter permease 0.76 0.67
    7 PS417_17485 membrane protein 0.82 0.67
    8 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.56 0.66
    9 PS417_17425 hypothetical protein no 0.65
    10 PS417_21750 acetyl-CoA synthetase 0.67 0.59
    11 PS417_17415 histidine kinase 0.67 0.57
    12 PS417_19965 histidine kinase 0.39 0.55
    13 PS417_17490 ABC transporter ATP-binding protein 0.78 0.53
    14 PS417_16570 isocitrate lyase 0.53 0.50
    15 PS417_17455 cytochrome C 0.70 0.50
    16 PS417_17505 LuxR family transcriptional regulator 0.67 0.46
    17 PS417_24765 membrane protein no 0.46
    18 PS417_26040 malate synthase 0.63 0.44
    19 PS417_04860 ATPase 0.39 0.39
    20 PS417_21035 multidrug transporter no 0.37

    Or look for negative cofitness