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  • Top cofit genes for GFF3410 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family
    SEED: transcriptional regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6788 Multicopper oxidase no 0.61
    2 GFF3250 Barstar, ribonuclease (Barnase) inhibitor no 0.59
    3 GFF1464 hypothetical protein no 0.59
    4 GFF6892 Uncharacterized glutathione S-transferase-like protein no 0.57
    5 GFF4869 Type IV secretory pathway, protease TraF no 0.54
    6 GFF1812 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.54
    7 GFF151 FIG00460174: hypothetical protein no 0.53
    8 GFF1169 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) no 0.53
    9 GFF2528 ABC transporter, ATP-binding protein PA3838 no 0.53
    10 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) no 0.51
    11 GFF5341 Efflux ABC transporter, permease protein no 0.51
    12 GFF1401 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.50
    13 GFF6432 no description no 0.50
    14 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.50
    15 GFF1310 hypothetical protein no 0.50
    16 GFF3366 Septum site-determining protein MinD no 0.50
    17 GFF2397 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.50
    18 GFF212 Ribosome association toxin RatA no 0.49
    19 GFF837 FIG01002808: hypothetical protein no 0.49
    20 GFF4596 Amidase family protein BDAG_03520 no 0.49

    Or look for negative cofitness