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  • Top cofit genes for PS417_17405 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14505 glycogen debranching protein no 0.22
    2 PS417_28440 hypothetical protein no 0.20
    3 PS417_11935 ABC transporter substrate-binding protein no 0.20
    4 PS417_06710 beta-ketoadipyl CoA thiolase no 0.20
    5 PS417_02160 hypothetical protein no 0.20
    6 PS417_18435 hypothetical protein no 0.19
    7 PS417_09420 LysR family transcriptional regulator no 0.19
    8 PS417_21070 aconitate hydratase no 0.18
    9 PS417_13965 acetoin utilization protein no 0.18
    10 PS417_14855 gluconolactonase no 0.18
    11 PS417_27910 PppA no 0.18
    12 PS417_06665 LysR family transcriptional regulator no 0.18
    13 PS417_26660 protein PilI 0.60 0.18
    14 PS417_11880 oxidoreductase no 0.17
    15 PS417_04300 FagA protein no 0.17
    16 PS417_10240 hypothetical protein 0.53 0.17
    17 PS417_25695 peroxiredoxin 0.31 0.17
    18 PS417_26655 chemotaxis protein no 0.17
    19 PS417_22345 acetyl-CoA carboxylase 0.48 0.17
    20 PS417_15125 glutathione S-transferase 0.33 0.16

    Or look for negative cofitness