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Cofit
Protein
Homologs
Top cofit genes for GFF3401 from
Variovorax sp. SCN45
P-hydroxylaminobenzoate lyase
SEED: P-hydroxylaminobenzoate lyase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3352
Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.65
2
GFF4158
hypothetical protein
no
0.64
3
GFF1546
Tripartite tricarboxylate transporter TctA family
no
0.64
4
GFF2178
Methyl-accepting chemotaxis sensor/transducer protein
no
0.60
5
GFF3001
Metal chaperone, involved in Zn homeostasis
no
0.59
6
GFF6823
BUG/TctC family periplasmic protein
no
0.56
7
GFF6323
Benzoate transport protein
no
0.54
8
GFF4326
Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1)
no
0.53
9
GFF5807
hypothetical protein
no
0.53
10
GFF4975
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
no
0.53
11
GFF1501
hypothetical protein
no
0.52
12
GFF2631
Transcriptional regulator, ArsR family
no
0.52
13
GFF4729
no description
no
0.51
14
GFF2308
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center
no
0.51
15
GFF4287
Acyl-CoA dehydrogenase
no
0.51
16
GFF3295
Endonuclease/exonuclease/phosphatase family protein
0.35
0.50
17
GFF6812
no description
no
0.50
18
GFF4299
3-ketoacyl-CoA thiolase
no
0.50
19
GFF4949
ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
no
0.50
20
GFF1810
Histidinol phosphatase and related hydrolases of the PHP family
no
0.49
Or look for
negative cofitness