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  • Top cofit genes for PS417_17400 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22050 ribonuclease BN no 0.22
    2 PS417_03015 hypothetical protein no 0.22
    3 PS417_20980 uroporphyrin-III methyltransferase 0.47 0.22
    4 PS417_07170 hypothetical protein 0.54 0.21
    5 PS417_00085 16S rRNA methyltransferase 0.40 0.21
    6 PS417_20520 3-phosphoglycerate kinase no 0.21
    7 PS417_13455 alkaline proteinase inhibitor no 0.20
    8 PS417_10615 hypothetical protein no 0.19
    9 PS417_07220 LysR family transcriptional regulator 0.36 0.18
    10 PS417_23670 Muconate cycloisomerase (EC 5.5.1.1) (from data) no 0.18
    11 PS417_16245 Fis family transcriptional regulator 0.48 0.18
    12 PS417_24745 gamma-glutamyl phosphate reductase no 0.18
    13 PS417_18225 phenol degradation protein meta no 0.18
    14 PS417_26350 peptidase C69 no 0.18
    15 PS417_05830 hypothetical protein 0.21 0.18
    16 PS417_28350 fatty acid methyltransferase no 0.17
    17 PS417_07375 ribonuclease D no 0.17
    18 PS417_12840 TetR family transcriptional regulator 0.29 0.17
    19 PS417_08985 histidine kinase no 0.17
    20 PS417_18970 hypothetical protein no 0.17

    Or look for negative cofitness