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  • Top cofit genes for GFF3398 from Variovorax sp. SCN45

    benzoate degradation ring-cleavage hydrolase
    SEED: benzoate degradation ring-cleavage hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4345 hypothetical protein no 0.57
    2 GFF3426 Predicted kinase no 0.55
    3 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.54
    4 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.53
    5 GFF2859 Excinuclease ABC subunit C 0.27 0.51
    6 GFF7037 Uncharacterized MFS-type transporter no 0.51
    7 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 0.32 0.50
    8 GFF5352 Split AAA-ATPase protein PA0787 no 0.50
    9 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.50
    10 GFF6861 no description no 0.50
    11 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) no 0.50
    12 GFF2786 Sulfate transporter family protein no 0.49
    13 GFF3338 Threonine efflux protein 0.82 0.49
    14 GFF2856 Transcriptional regulator, LysR family no 0.49
    15 GFF6717 hypothetical protein no 0.48
    16 GFF4824 Transcriptional regulator, AraC family no 0.47
    17 GFF3658 hypothetical protein no 0.47
    18 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI no 0.47
    19 GFF1702 hypothetical protein no 0.46
    20 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.46

    Or look for negative cofitness