Top cofit genes for GFF3397 from Variovorax sp. SCN45

Benzoate ABC transporter, substrate-binding protein
SEED: Benzoate transport, extracellular ligand-binding receptor
KEGG: branched-chain amino acid transport system substrate-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.61
2 GFF7152 no description no 0.54
3 GFF6051 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.53
4 GFF3356 Probable transmembrane protein no 0.52
5 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.51
6 GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.50
7 GFF3981 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.50
8 GFF7086 Transcriptional regulator, IclR family no 0.48
9 GFF6610 putative lipoprotein no 0.47
10 GFF1850 Tetracenomycin polyketide synthesis O-methyltransferase TcmP no 0.47
11 GFF519 Transcriptional regulator, AcrR family no 0.47
12 GFF4451 Permease of the drug/metabolite transporter (DMT) superfamily no 0.47
13 GFF2237 Intracellular protease no 0.47
14 GFF3720 Alternative dihydrofolate reductase 3 no 0.47
15 GFF4660 hypothetical protein no 0.47
16 GFF3713 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) no 0.46
17 GFF3312 Sensory histidine kinase CreC of two-component signal transduction system CreBC 0.29 0.46
18 GFF5289 hypothetical protein no 0.46
19 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.45
20 GFF2080 Protein acetyltransferase no 0.45

Or look for negative cofitness