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Cofit
Protein
Homologs
Top cofit genes for GFF3397 from
Sphingobium sp. HT1-2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1301
Signal peptide peptidase SppA (protease 4)
no
0.78
2
GFF1030
Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like
no
0.76
3
GFF3213
Outer membrane protein
no
0.70
4
GFF3096
Outer membrane component of TAM transport system
no
0.70
5
GFF4133
tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE
no
0.70
6
GFF1764
Outer membrane protein A precursor
no
0.69
7
GFF1460
glycoside hydrolase, family 25
no
0.68
8
GFF4205
Ubiquinol-cytochrome C chaperone
no
0.68
9
GFF2254
DksA family protein PA5536 (no Zn-finger)
no
0.67
10
GFF2814
Altronate dehydratase (EC 4.2.1.7)
no
0.66
11
GFF2249
Outer membrane component of TAM transport system
no
0.64
12
GFF3352
TonB-dependent receptor
no
0.64
13
GFF540
23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266)
no
0.64
14
GFF646
Aspartate aminotransferase (EC 2.6.1.1)
no
0.63
15
GFF2007
Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated
no
0.63
16
GFF1673
DNA-binding protein HU-beta
0.39
0.63
17
GFF3263
Ferrous iron transporter FeoB
no
0.63
18
GFF4202
hypothetical protein
no
0.62
19
GFF4110
hypothetical protein
no
0.62
20
GFF4771
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
no
0.62
Or look for
negative cofitness