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  • Top cofit genes for PS417_17370 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24155 ATP-binding protein no 0.33
    2 PS417_24655 hypothetical protein no 0.23
    3 PS417_20985 porin no 0.22
    4 PS417_21895 nuclease PIN no 0.22
    5 PS417_00170 glucarate transporter 0.30 0.21
    6 PS417_20885 Xanthine dehydrogenase (EC 1.17.1.4) (from data) 0.29 0.21
    7 PS417_25090 hypothetical protein no 0.21
    8 PS417_28160 hypothetical protein no 0.21
    9 PS417_21920 transcriptional regulator 0.44 0.21
    10 PS417_00690 hypothetical protein no 0.21
    11 PS417_26190 sarcosine oxidase subunit beta 0.77 0.20
    12 PS417_12640 GNAT family acetyltransferase no 0.20
    13 PS417_07220 LysR family transcriptional regulator 0.35 0.19
    14 PS417_19555 RNA polymerase sigma70 no 0.19
    15 PS417_18450 hydrolase 0.29 0.19
    16 PS417_16650 hypothetical protein 0.17 0.19
    17 PS417_20125 phosphoribosylglycinamide formyltransferase no 0.19
    18 PS417_20160 cysteine synthase 0.35 0.19
    19 PS417_17955 pyridoxamine 5'-phosphate oxidase no 0.18
    20 PS417_08125 prephenate dehydratase 0.59 0.18

    Or look for negative cofitness