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  • Top cofit genes for GFF3394 from Sphingobium sp. HT1-2

    Transcriptional regulator CidR, LysR family
    SEED: LysR family regulatory protein CidR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5112 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.73
    2 GFF4399 Type I secretion outer membrane protein, TolC family 0.23 0.73
    3 GFF1157 Acylphosphate phosphohydrolase (EC 3.6.1.7) no 0.73
    4 GFF2923 hypothetical protein no 0.70
    5 GFF989 Psp operon transcriptional activator no 0.70
    6 GFF2930 hypothetical protein no 0.68
    7 GFF4861 hypothetical protein no 0.66
    8 GFF3909 hypothetical protein no 0.65
    9 GFF2934 hypothetical protein no 0.64
    10 GFF4627 hypothetical protein no 0.64
    11 GFF2727 alpha-L-arabinofuranosidase (EC 3.2.1.55) no 0.63
    12 GFF4896 hypothetical protein no 0.63
    13 GFF2788 GCN5-related N-acetyltransferase no 0.61
    14 GFF3943 NifU-like domain protein no 0.61
    15 GFF3417 Protein of unknown function DUF55 no 0.60
    16 GFF1611 tRNA (guanine(46)-N(7))-methyltransferase (EC 2.1.1.33) no 0.60
    17 GFF1304 hypothetical protein no 0.60
    18 GFF311 Vitamin B12 ABC transporter, ATP-binding protein BtuD no 0.59
    19 GFF2514 hypothetical protein no 0.59
    20 GFF4259 hypothetical protein no 0.59

    Or look for negative cofitness