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  • Top cofit genes for PS417_17360 from Pseudomonas simiae WCS417

    D-galacturonate dehydrogenase (EC 1.1.1.203) (from data)
    Original annotation: NAD-dependent dehydratase
    SEED: UDP-glucose 4-epimerase (EC 5.1.3.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04200 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) (from data) 0.89 0.43
    2 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.65 0.35
    3 PS417_17365 galactaro-1,5-lactonase (from data) 0.94 0.29
    4 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.95 0.28
    5 PS417_04210 Galactarate dehydratase (EC 4.2.1.42) (from data) 0.55 0.27
    6 PS417_07595 PasA protein no 0.23
    7 PS417_14740 chemotaxis protein no 0.19
    8 PS417_00170 glucarate transporter no 0.19
    9 PS417_14775 major facilitator transporter 0.72 0.18
    10 PS417_28430 alpha-2-macroglobulin no 0.18
    11 PS417_01210 hypothetical protein 0.12 0.18
    12 PS417_10535 hypothetical protein no 0.18
    13 PS417_04650 D-alanine--D-alanine ligase no 0.18
    14 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase no 0.17
    15 PS417_27680 acetyl-CoA hydrolase 0.50 0.17
    16 PS417_21465 septum formation inhibitor Maf no 0.17
    17 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.11 0.17
    18 PS417_13995 NADP-dependent oxidoreductase no 0.16
    19 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.16
    20 PS417_28335 dihydroorotase no 0.16

    Or look for negative cofitness