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  • Top cofit genes for GFF3390 from Variovorax sp. SCN45

    Transcriptional activator of acetoin dehydrogenase operon AcoR
    SEED: Transcriptional activator of acetoin dehydrogenase operon AcoR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.53
    2 GFF6721 Transcriptional regulator, LysR family no 0.51
    3 GFF7251 Mobile element protein no 0.50
    4 GFF4405 hypothetical protein no 0.50
    5 GFF5634 no description no 0.50
    6 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase 0.84 0.50
    7 GFF5806 RNA polymerase ECF-type sigma factor no 0.49
    8 GFF6918 Transcriptional regulator, AraC family no 0.47
    9 GFF4244 Acid phosphatase (EC 3.1.3.2) no 0.46
    10 GFF857 no description no 0.46
    11 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.45
    12 GFF1317 no description no 0.44
    13 GFF297 FIG00978250: hypothetical protein no 0.44
    14 GFF336 no description no 0.44
    15 GFF402 hypothetical protein no 0.44
    16 GFF5529 Putative outer membrane protein no 0.44
    17 GFF2384 no description no 0.44
    18 GFF6930 no description no 0.43
    19 GFF557 Plectin 1 no 0.43
    20 GFF2278 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.43

    Or look for negative cofitness