Top cofit genes for GFF339 from Hydrogenophaga sp. GW460-11-11-14-LB1

Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF4868 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no 0.65
2 GFF3729 Serine protease precursor MucD/AlgY associated with sigma factor RpoE no 0.64
3 GFF340 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.45 0.64
4 GFF697 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.63
5 GFF195 Oxidoreductase, Gfo/Idh/MocA family no 0.63
6 GFF5781 hypothetical protein no 0.62
7 GFF3140 IncF plasmid conjugative transfer pilus assembly protein TraW 0.30 0.62
8 GFF2562 hypothetical protein no 0.62
9 GFF5352 TRAP transporter solute receptor, unknown substrate 5 no 0.61
10 GFF687 Probable transmembrane protein no 0.61
11 GFF3928 LSU ribosomal protein L9p no 0.60
12 GFF342 transcriptional regulator, Crp/Fnr family no 0.59
13 GFF3692 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) no 0.59
14 GFF3357 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.57 0.58
15 GFF346 Chaperone protein HtpG 0.73 0.58
16 GFF240 SlyX protein no 0.57
17 GFF3555 Fatty acid desaturase no 0.57
18 GFF2560 hypothetical protein no 0.57
19 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.34 0.57
20 GFF5358 Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16) no 0.57

Or look for negative cofitness