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  • Top cofit genes for PS417_17335 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
    KEGG: TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17515 GfdT protein no 0.22
    2 PS417_27020 DNA-binding protein no 0.22
    3 PS417_10085 head morphogenesis protein no 0.21
    4 PS417_16070 TonB-dependent receptor no 0.20
    5 PS417_10090 hypothetical protein no 0.19
    6 PS417_17435 dehydrogenase no 0.19
    7 PS417_17510 histidine kinase no 0.19
    8 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.19
    9 PS417_24390 peptidase no 0.19
    10 PS417_22615 hypothetical protein 0.33 0.18
    11 PS417_12800 alpha-amylase 0.13 0.18
    12 PS417_22355 glycine cleavage system protein H no 0.18
    13 PS417_20620 glycosyl transferase family 2 no 0.18
    14 PS417_00885 integrase no 0.18
    15 PS417_17485 membrane protein no 0.18
    16 PS417_15350 membrane protein no 0.18
    17 PS417_17425 hypothetical protein no 0.18
    18 PS417_17190 MarR family transcriptional regulator 0.70 0.18
    19 PS417_15570 excinuclease ABC subunit A 0.36 0.18
    20 PS417_09720 methyltransferase no 0.18

    Or look for negative cofitness