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  • Top cofit genes for GFF3384 from Variovorax sp. SCN45

    Transcriptional regulator, Crp/Fnr family
    SEED: transcriptional regulator, Crp/Fnr family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3218 Phage tail fiber no 0.56
    2 GFF6334 no description no 0.56
    3 GFF4974 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.51
    4 GFF2725 Isochorismatase (EC 3.3.2.1) no 0.51
    5 GFF2332 Transcriptional regulator, LysR family no 0.50
    6 GFF5785 FIG00931285: hypothetical protein no 0.49
    7 GFF1566 no description no 0.49
    8 GFF7171 Transcriptional regulator DmlR, LysR family no 0.47
    9 GFF618 Lactoylglutathione lyase and related lyases no 0.47
    10 GFF181 Protein of unknown function (DUF1501) no 0.47
    11 GFF779 hypothetical protein no 0.47
    12 GFF1209 hypothetical protein no 0.47
    13 GFF1765 putative membrane protein no 0.47
    14 GFF856 no description no 0.47
    15 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.47
    16 GFF3704 FIG00536957: hypothetical protein no 0.46
    17 GFF5296 putative iron-regulated membrane protein no 0.46
    18 GFF2951 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.46
    19 GFF1650 NmrA-like no 0.45
    20 GFF790 hypothetical protein no 0.44

    Or look for negative cofitness