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Cofit
Protein
Homologs
Top cofit genes for GFF3379 from
Variovorax sp. SCN45
Aromatic--CoA ligase
KEGG: feruloyl-CoA synthase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6398
SH3, type 3
no
0.60
2
GFF6565
hypothetical protein
no
0.51
3
GFF5091
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
no
0.50
4
GFF246
Transmembrane protein Msl3831
no
0.49
5
GFF3350
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.49
6
GFF5111
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.48
7
GFF5611
BUG/TctC family periplasmic protein
no
0.47
8
GFF1351
Acyl-CoA dehydrogenase
no
0.47
9
GFF4508
no description
no
0.46
10
GFF2191
Pca operon transcriptional activator PcaQ
no
0.46
11
GFF4179
hypothetical protein
no
0.46
12
GFF4818
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
no
0.45
13
GFF1420
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
no
0.45
14
GFF1389
Paraquat-inducible protein B
no
0.45
15
GFF1211
D-aminopeptidase (EC 3.4.11.19)
no
0.44
16
GFF1684
no description
no
0.44
17
GFF6563
no description
no
0.43
18
GFF7240
Polyhydroxyalkanoic acid synthase
no
0.43
19
GFF5300
ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.43
20
GFF2312
Regulatory protein, LuxR:Response regulator receiver
no
0.43
Or look for
negative cofitness