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  • Top cofit genes for GFF3379 from Variovorax sp. SCN45

    Aromatic--CoA ligase
    KEGG: feruloyl-CoA synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6398 SH3, type 3 no 0.60
    2 GFF6565 hypothetical protein no 0.51
    3 GFF5091 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) no 0.50
    4 GFF246 Transmembrane protein Msl3831 no 0.49
    5 GFF3350 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.49
    6 GFF5111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    7 GFF5611 BUG/TctC family periplasmic protein no 0.47
    8 GFF1351 Acyl-CoA dehydrogenase no 0.47
    9 GFF4508 no description no 0.46
    10 GFF2191 Pca operon transcriptional activator PcaQ no 0.46
    11 GFF4179 hypothetical protein no 0.46
    12 GFF4818 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.45
    13 GFF1420 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.45
    14 GFF1389 Paraquat-inducible protein B no 0.45
    15 GFF1211 D-aminopeptidase (EC 3.4.11.19) no 0.44
    16 GFF1684 no description no 0.44
    17 GFF6563 no description no 0.43
    18 GFF7240 Polyhydroxyalkanoic acid synthase no 0.43
    19 GFF5300 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.43
    20 GFF2312 Regulatory protein, LuxR:Response regulator receiver no 0.43

    Or look for negative cofitness