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    • Top cofit genes for GFF3363 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.53
    2 GFF6336 no description no 0.48
    3 GFF3378 hypothetical protein no 0.47
    4 GFF2976 hypothetical protein no 0.47
    5 GFF5752 Flagellin FliC no 0.45
    6 GFF4563 Ferredoxin, 2Fe-2S no 0.44
    7 GFF4734 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) no 0.44
    8 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.42
    9 GFF5352 Split AAA-ATPase protein PA0787 no 0.42
    10 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.42
    11 GFF1380 Peptidase M48, Ste24p no 0.42
    12 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) no 0.40
    13 GFF7281 no description no 0.40
    14 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.40
    15 GFF3311 FIG00349859: hypothetical protein no 0.40
    16 GFF5615 Citrate synthase (si) (EC 2.3.3.1) no 0.40
    17 GFF4087 Cystathionine beta-lyase (EC 4.4.1.8) no 0.40
    18 GFF5713 Flagellar basal-body P-ring formation protein FlgA no 0.40
    19 GFF2997 FIG027190: Putative transmembrane protein no 0.39
    20 GFF2204 no description no 0.39

    Or look for negative cofitness