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Cofit
Protein
Homologs
Top cofit genes for GFF3362 from
Variovorax sp. SCN45
Fatty acid desaturase
SEED: fatty acid desaturase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4397
hypothetical protein
no
0.56
2
GFF7374
FIG00984748: hypothetical protein
no
0.53
3
GFF7373
CaiB/BaiF family protein
no
0.51
4
GFF5038
Tetracycline resistance, MFS efflux pump => Tet(C)
no
0.51
5
GFF3459
Aliphatic amidase AmiE (EC 3.5.1.4)
no
0.50
6
GFF6020
UPF0246 protein YaaA
no
0.49
7
GFF5856
Outer membrane receptor proteins, likely involved in siderophore uptake
no
0.49
8
GFF3452
hypothetical protein
no
0.49
9
GFF3371
FIG00456413: hypothetical protein
no
0.49
10
GFF3970
Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
no
0.48
11
GFF4910
hypothetical protein
no
0.48
12
GFF4217
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.48
13
GFF4252
hypothetical protein
no
0.48
14
GFF5248
Outer membrane porin protein 32 precursor
no
0.47
15
GFF7146
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
no
0.47
16
GFF3844
Transcriptional regulator, LysR family
0.35
0.47
17
GFF2197
Type I secretion system ATPase, LssB family LapB
no
0.47
18
GFF4566
hypothetical protein
no
0.47
19
GFF255
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)
no
0.47
20
GFF5394
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.46
Or look for
negative cofitness