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  • Top cofit genes for GFF3362 from Variovorax sp. SCN45

    Fatty acid desaturase
    SEED: fatty acid desaturase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4397 hypothetical protein no 0.56
    2 GFF7374 FIG00984748: hypothetical protein no 0.53
    3 GFF7373 CaiB/BaiF family protein no 0.51
    4 GFF5038 Tetracycline resistance, MFS efflux pump => Tet(C) no 0.51
    5 GFF3459 Aliphatic amidase AmiE (EC 3.5.1.4) no 0.50
    6 GFF6020 UPF0246 protein YaaA no 0.49
    7 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.49
    8 GFF3452 hypothetical protein no 0.49
    9 GFF3371 FIG00456413: hypothetical protein no 0.49
    10 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) no 0.48
    11 GFF4910 hypothetical protein no 0.48
    12 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.48
    13 GFF4252 hypothetical protein no 0.48
    14 GFF5248 Outer membrane porin protein 32 precursor no 0.47
    15 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster no 0.47
    16 GFF3844 Transcriptional regulator, LysR family 0.35 0.47
    17 GFF2197 Type I secretion system ATPase, LssB family LapB no 0.47
    18 GFF4566 hypothetical protein no 0.47
    19 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.47
    20 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.46

    Or look for negative cofitness