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  • Top cofit genes for GFF3356 from Variovorax sp. SCN45

    Probable transmembrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3014 KEGG: type VI secretion system protein ImpF no 0.58
    2 GFF3391 Chlorogenate esterase no 0.57
    3 GFF5444 FIG005080: Possible exported protein no 0.56
    4 GFF1954 no description no 0.56
    5 GFF6368 T6SS lysozyme-like component TssE no 0.56
    6 GFF2605 Tricarboxylate transport sensor protein TctE no 0.55
    7 GFF1650 NmrA-like no 0.54
    8 GFF3224 no description no 0.54
    9 GFF3793 no description no 0.53
    10 GFF3340 FIG00932469: hypothetical protein no 0.53
    11 GFF6093 1,2-phenylacetyl-CoA epoxidase, subunit A (EC 1.14.13.149) no 0.52
    12 GFF1023 UPF0311 protein RPA1785 no 0.52
    13 GFF4820 BUG/TctC family periplasmic protein no 0.52
    14 GFF3397 Benzoate ABC transporter, substrate-binding protein no 0.52
    15 GFF2585 no description no 0.52
    16 GFF754 FIG00975093: hypothetical protein no 0.52
    17 GFF3655 no description no 0.52
    18 GFF3486 glutamine synthetase family protein no 0.52
    19 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.50
    20 GFF3802 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.50

    Or look for negative cofitness