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  • Top cofit genes for GFF3354 from Variovorax sp. SCN45

    FIG00537998: hypothetical protein
    SEED: FIG00537998: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3109 Methionine ABC transporter substrate-binding protein no 0.55
    2 GFF1918 hypothetical protein no 0.53
    3 GFF6161 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.53
    4 GFF6056 Transcriptional regulator, LacI family no 0.52
    5 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.51
    6 GFF6969 hypothetical protein no 0.50
    7 GFF6323 Benzoate transport protein no 0.50
    8 GFF6849 MotA/TolQ/ExbB proton channel family protein no 0.49
    9 GFF2001 Putative phosphatase YieH no 0.48
    10 GFF5915 T6SS secretion lipoprotein TssJ (VasD) no 0.47
    11 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ no 0.47
    12 GFF2777 Uncharacterized UPF0721 integral membrane protein no 0.47
    13 GFF1546 Tripartite tricarboxylate transporter TctA family no 0.47
    14 GFF4469 Cell division protein FtsA no 0.47
    15 GFF247 ATP-dependent helicase HrpA no 0.47
    16 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.46
    17 GFF6663 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.46
    18 GFF5449 Probable lipoprotein YiaD no 0.46
    19 GFF2584 Sulfate permease no 0.46
    20 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF no 0.46

    Or look for negative cofitness