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  • Top cofit genes for GFF3354 from Sphingobium sp. HT1-2

    Uncharacterized amino acid permease, GabP family
    KEGG: basic amino acid/polyamine antiporter, APA family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3985 hypothetical protein no 0.73
    2 GFF5004 Putative protein-S-isoprenylcysteine methyltransferase no 0.72
    3 GFF4618 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.71
    4 GFF533 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) no 0.70
    5 GFF1390 Acyl-CoA dehydrogenase no 0.69
    6 GFF4465 protein of unknown function DUF1622 no 0.65
    7 GFF3618 conserved hypothetical protein no 0.65
    8 GFF3762 hypothetical protein no 0.65
    9 GFF3020 TonB-dependent receptor no 0.65
    10 GFF413 Outer membrane protein A precursor no 0.65
    11 GFF4634 hypothetical protein no 0.65
    12 GFF4450 CopG protein no 0.65
    13 GFF2828 Transcriptional regulator, AsnC family 0.92 0.64
    14 GFF4610 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.43 0.64
    15 GFF2406 Xylan 1,4-beta-xylosidase (EC 3.2.1.37) no 0.64
    16 GFF443 Ferredoxin, 2Fe-2S no 0.63
    17 GFF5283 Mobilization protein MobA @ Conjugal transfer protein TraA no 0.61
    18 GFF5393 Response regulator receiver protein no 0.61
    19 GFF2748 Pole remodelling regulatory diguanylate cyclase no 0.61
    20 GFF2611 Threonine-synthase-like protein 2 no 0.61

    Or look for negative cofitness