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  • Top cofit genes for PS417_17140 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Phosphonate uptake and metabolism regulator, LysR-family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16555 cupin no 0.24
    2 PS417_21800 MFS transporter no 0.21
    3 PS417_08395 ABC transporter permease 0.12 0.19
    4 PS417_09335 HAD family hydrolase 0.62 0.19
    5 PS417_08415 hypothetical protein no 0.19
    6 PS417_02045 3-oxoacyl-ACP synthase no 0.19
    7 PS417_02340 LysR family transcriptional regulator no 0.19
    8 PS417_08425 acetyltransferase no 0.18
    9 PS417_08405 esterase no 0.18
    10 PS417_07120 RNA polymerase sigma-H factor no 0.18
    11 PS417_05925 spermidine/putrescine ABC transporter permease no 0.18
    12 PS417_23620 epimerase no 0.17
    13 PS417_02205 peptide methionine sulfoxide reductase no 0.17
    14 PS417_16940 chemotaxis protein CheY no 0.17
    15 PS417_23595 D-aminoacylase no 0.17
    16 PS417_19920 AraC family transcriptional regulator no 0.17
    17 PS417_05785 tail protein no 0.17
    18 PS417_03705 2-alkenal reductase no 0.17
    19 PS417_16970 membrane protein no 0.17
    20 PS417_12970 FMN-dependent NADH-azoreductase no 0.17

    Or look for negative cofitness