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  • Top cofit genes for PS417_17135 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19380 glutathione S-transferase no 0.29
    2 PS417_16070 TonB-dependent receptor no 0.28
    3 PS417_17515 GfdT protein no 0.24
    4 PS417_11170 aldehyde dehydrogenase no 0.23
    5 PS417_12565 2-dehydro-3-deoxygluconokinase no 0.23
    6 PS417_25105 hypothetical protein no 0.23
    7 PS417_06970 LysR family transcriptional regulator no 0.23
    8 PS417_13425 cupin no 0.22
    9 PS417_06365 RNA polymerase sigma factor no 0.22
    10 PS417_15570 excinuclease ABC subunit A no 0.21
    11 PS417_10415 hypothetical protein no 0.21
    12 PS417_12530 LysR family transcriptional regulator no 0.21
    13 PS417_20425 hypothetical protein no 0.21
    14 PS417_15745 lipid carrier protein no 0.21
    15 PS417_20955 secretion protein no 0.21
    16 PS417_06020 membrane protein no 0.20
    17 PS417_28110 transglycosylase no 0.20
    18 PS417_27475 membrane protein no 0.20
    19 PS417_25775 lipoprotein no 0.20
    20 PS417_02150 potassium/proton antiporter no 0.20

    Or look for negative cofitness