• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3349 from Variovorax sp. SCN45

    Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7136 hypothetical protein no 0.66
    2 GFF5965 hypothetical protein no 0.60
    3 GFF6571 Conjugative transfer protein TrbI no 0.58
    4 GFF7416 DNA/RNA non-specific endonuclease no 0.58
    5 GFF6349 no description no 0.58
    6 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.56
    7 GFF1932 no description no 0.56
    8 GFF116 RidA/YER057c/UK114 superfamily, group 1 no 0.55
    9 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.54
    10 GFF6175 hypothetical protein no 0.54
    11 GFF627 Secretion protein HlyD no 0.54
    12 GFF2856 Transcriptional regulator, LysR family no 0.54
    13 GFF6015 Transcriptional regulator PA0877, LysR family no 0.54
    14 GFF2737 Uncharacterized MFS-type transporter no 0.54
    15 GFF374 Transcription elongation factor GreA no 0.53
    16 GFF7170 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.53
    17 GFF7037 Uncharacterized MFS-type transporter no 0.52
    18 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.52
    19 GFF5053 Uncharacterized protein SPO0681 no 0.52
    20 GFF6575 Conjugative transfer protein TrbJ no 0.51

    Or look for negative cofitness