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Cofit
Protein
Homologs
Top cofit genes for GFF3348 from
Variovorax sp. SCN45
Putative lipase
SEED: Acyl-CoA thioesterase I
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6112
Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1)
no
0.58
2
GFF6148
hypothetical protein
no
0.53
3
GFF5148
Taurine ABC transporter, substrate-binding protein TauA
no
0.53
4
GFF6889
Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase
no
0.52
5
GFF6171
Na(+) H(+) antiporter subunit D
no
0.52
6
GFF5862
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.52
7
GFF6931
no description
no
0.52
8
GFF6407
Phytanoyl-CoA dioxygenase
no
0.51
9
GFF5597
Two-component transcriptional response regulator, LuxR family
no
0.50
10
GFF6125
Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1)
no
0.50
11
GFF3392
Transcriptional regulator, AraC family
no
0.50
12
GFF6067
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.49
13
GFF861
S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase
no
0.49
14
GFF1007
Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)
no
0.48
15
GFF185
hypothetical protein
no
0.48
16
GFF4801
DedA protein
no
0.48
17
GFF2790
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.47
18
GFF1341
ABC transporter, ATP-binding protein 2 RSc1754
no
0.47
19
GFF6219
hypothetical protein
no
0.47
20
GFF4859
MBL-fold metallo-hydrolase superfamily
no
0.46
Or look for
negative cofitness